PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS780960.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 223aa    MW: 25117.9 Da    PI: 7.7537
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS780960.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.7e-1194137654
                   HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
           HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                    ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  EcS780960.10  94 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILCDTIDYMKEL 137
                   589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.01E-1586150IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.28188137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-994137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-1094143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.14E-495141No hitNo description
Gene3DG3DSA:4.10.280.101.3E-1495147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
PQITSSSYSP CDDAPLFPVQ ERTLPLSVMT EEGEATFLHA DGFKQTIGMQ GDCKPESMES  60
PNNQVPVFSA AGPSVGAKNN RARKKSGGQP SKNLMAERRR RKRLNDRLSM LRSIVPKISK  120
MDRTSILCDT IDYMKELLQK INHLQHDSQF GPYHLNIMDI IEDMKPNEML VRNTPKFNVE  180
RRDVETRIEI CCATKPGLLL SMVSKLDALG LDMQECVISC FND
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
182102RKKSGGQPSKNLMAERRRRKR
296103ERRRRKRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060134.11e-163PREDICTED: transcription factor bHLH61-like isoform X2
SwissprotQ9LSL15e-56BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A059BKD71e-163A0A059BKD7_EUCGR; Uncharacterized protein
STRINGVIT_18s0001g08040.t012e-74(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM20432878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-57beta HLH protein 93